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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs66897810 chr10:117936238 CTCCT/TTCCT TFF2 chr21:43766466-43771237:- 0.84 7.49 3.51E-11 Box Plot
THYM rs67580838 chr9:1000254 G/A HNRNPCL1 chr1:12907261-12908578:- 0.48 8.07 2.12E-12 Box Plot
THYM rs676786 chr20:767720 C/T AQP2 chr12:50344524-50352664:+ 1.19 7.09 2.39E-10 Box Plot
THYM rs681238 chr6:44205845 A/C HSP90AB2P chr4:13335038-13340281:+ 0.62 7.45 4.2E-11 Box Plot
THYM rs6870359 chr5:176710065 C/G LOC388955 chr2:63849182-63850159:- 0.84 12.93 1.18E-22 Box Plot
THYM rs6874206 chr5:176650971 G/T LOC388955 chr2:63849182-63850159:- -0.8 -11.52 1.0E-19 Box Plot
THYM rs6875885 chr5:176571989 T/G LOC388955 chr2:63849182-63850159:- -0.57 -7.74 1.07E-11 Box Plot
THYM rs6877611 chr5:176684905 G/T LOC388955 chr2:63849182-63850159:- 0.8 11.54 9.08E-20 Box Plot
THYM rs6880798 chr5:176704457 C/T LOC388955 chr2:63849182-63850159:- 0.77 10.99 1.27E-18 Box Plot
THYM rs6882591 chr5:176546460 G/A LOC388955 chr2:63849182-63850159:- -0.73 -10.97 1.43E-18 Box Plot
THYM rs6885410 chr5:176740996 G/T LOC388955 chr2:63849182-63850159:- 0.54 8.81 5.75E-14 Box Plot
THYM rs6886255 chr5:176718361 A/G LOC388955 chr2:63849182-63850159:- 0.58 8.51 2.53E-13 Box Plot
THYM rs6889220 chr5:176693888 G/A LOC388955 chr2:63849182-63850159:- 0.82 11.98 1.08E-20 Box Plot
THYM rs6890580 chr5:176653520 G/A LOC388955 chr2:63849182-63850159:- -0.57 -8.13 1.62E-12 Box Plot
THYM rs6898107 chr5:176679695 A/G LOC388955 chr2:63849182-63850159:- 0.8 11.54 9.08E-20 Box Plot